Dear Masih,
With WaveMod = 5, I would expect the wave elevation output by HydroDyn to match the input wave elevation only if:
- Second-order wave kinematics are disabled i.e. WvDiffQTF = WvSumQTF = False. With WaveMod = 5, the input wave elevation is assumed to be first-order such that the second-order terms are added to it, which would have some influence on the wave elevation.
- The lower and upper cut-off frequencies of the first-order wave spectrum are disabled i.e. WvLowCOff = 0 and WvHiCOff > WaveOmegaMax.
These issues have been discussed a bit in the following forum topic: User input kinematics for floater in FAST - #5 by Jason.Jonkman.
Best regards,