Dear Daniel,
Here are my answers to your questions:
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Correct.
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For hydro_M, you could use the hydrodynamic added mass from WAMIT (or in your case, AQWA) at a given frequency e.g. the zero-frequency limit.
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C^Hydrostatic_ij in the OC3-Hywind specification report only includes the buoyancy-related restoring; the body weight-related restoring is not included om C^Hydrostatic_ij, but should be included in the platform stiffness specified in BModes–see the following forum topic for more information: BModes : Input parameters about tower support subsystem - #2 by Jason.Jonkman.
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Correct, MoorDyn cannot currently export the mooring stiffness matrix. You could use MAP++ or an equivalent tool to derive this.
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Without modification of the source code, HydroDyn cannot directly output the 6x6 added-mass matrix associated with strip-theory (Morison) members. And HydroDyn does not intrinsically form the 6x6 hydrostatic restoring matrix for strip-theory members, but instead, this restoring matrix is specified via the 6c6 AddCLin matrix input to HydroDyn.
I hope that helps.
Best regards